Detailed information of matrix profile PB0177.1

  1. Home
  2. Matrix > PB0177.1

Profile summary
Name: Sox7_2
Matrix ID: PB0177.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P40646  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 7 16 21 9 29 64 75 8 14 25 30 19 18 15 27 22 18 33 23 6 20 18 ]
C [ 13 11 27 46 10 18 4 6 4 9 4 31 19 17 24 11 18 20 36 7 32 29 ]
G [ 65 15 36 27 15 7 9 4 2 62 3 34 10 56 21 57 30 27 18 46 30 20 ]
T [ 15 58 17 17 46 11 12 81 79 4 64 16 53 13 28 10 34 20 23 41 17 33 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0177.1 PB0177 1 Sox7_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: