Detailed information of matrix profile PB0176.1

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Profile summary
Name: Sox5_2
Matrix ID: PB0176.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P35710  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 25 35 25 1 57 15 54 76 17 10 35 60 14 25 29 ]
C [ 23 22 13 74 6 2 28 10 10 23 17 20 30 24 21 ]
G [ 24 16 22 9 19 16 13 4 9 7 18 11 45 26 25 ]
T [ 28 27 41 17 18 66 5 11 64 61 30 8 10 25 25 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0176.1 PB0176 1 Sox5_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: