Detailed information of matrix profile PB0175.1

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Profile summary
Name: Sox4_2
Matrix ID: PB0175.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q06945  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 22 27 47 41 43 79 93 1 2 12 10 13 34 23 29 31 45 ]
C [ 25 24 16 11 10 1 1 2 1 3 1 24 20 27 10 18 16 ]
G [ 41 30 12 24 29 17 4 1 1 84 1 9 24 29 42 28 21 ]
T [ 13 20 25 24 18 4 2 95 96 1 88 54 21 21 19 23 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0175.1 PB0175 1 Sox4_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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