Detailed information of matrix profile PB0174.1

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Profile summary
Name: Sox30_2
Matrix ID: PB0174.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8CGW4  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 17 46 35 15 77 8 3 84 5 88 84 9 47 20 23 21 ]
C [ 21 27 19 22 11 4 6 6 5 4 4 3 29 41 23 25 ]
G [ 10 12 20 40 3 4 4 5 6 6 4 11 13 20 46 38 ]
T [ 52 16 26 23 9 84 88 5 84 3 8 77 11 19 8 15 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0174.1 PB0174 1 Sox30_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: