Detailed information of matrix profile PB0173.1

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Profile summary
Name: Sox21_2
Matrix ID: PB0173.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q811W0  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 29 31 9 16 46 88 1 3 2 8 4 3 24 22 26 23 35 ]
C [ 29 26 33 42 15 2 5 2 10 2 19 62 35 22 31 20 20 ]
G [ 26 31 16 24 3 4 2 2 85 2 14 20 23 29 16 25 28 ]
T [ 16 12 43 18 36 7 92 93 2 88 64 16 18 27 27 31 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0173.1 PB0173 1 Sox21_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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