Detailed information of matrix profile PB0172.1

  1. Home
  2. Matrix > PB0172.1

Profile summary
Name: Sox1_2
Matrix ID: PB0172.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P53783  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 15 31 36 5 69 91 2 84 86 9 19 73 16 41 20 ]
C [ 36 20 36 16 16 4 83 5 3 15 10 5 24 17 17 ]
G [ 26 39 14 20 12 3 9 6 6 4 15 14 14 25 32 ]
T [ 22 10 14 59 3 2 6 5 5 71 57 7 46 17 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0172.1 PB0172 1 Sox1_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: