Detailed information of matrix profile PB0169.1

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Profile summary
Name: Sox15_2
Matrix ID: PB0169.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P43267  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 4 8 25 65 69 10 10 31 16 74 16 13 18 46 35 ]
C [ 26 38 15 8 16 14 7 16 69 8 6 17 33 19 29 ]
G [ 17 32 42 15 6 5 31 12 10 10 26 9 20 18 25 ]
T [ 53 22 17 13 10 71 52 41 5 8 53 62 29 16 11 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0169.1 PB0169 1 Sox15_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: