Detailed information of matrix profile PB0168.1

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Profile summary
Name: Sox14_2
Matrix ID: PB0168.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04892  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 18 28 24 10 18 75 1 1 2 4 4 5 31 43 25 ]
C [ 30 35 24 59 52 1 1 1 4 2 27 20 23 34 21 ]
G [ 34 20 26 11 3 2 2 2 93 1 53 11 33 13 35 ]
T [ 18 17 25 20 27 23 96 96 1 93 15 64 13 11 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0168.1 PB0168 1 Sox14_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: