Detailed information of matrix profile PB0167.1

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Profile summary
Name: Sox13_2
Matrix ID: PB0167.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04891  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 44 34 35 24 34 13 12 8 58 8 9 13 52 38 20 47 22 ]
C [ 24 15 11 12 18 71 77 79 2 66 79 78 12 11 31 15 41 ]
G [ 13 20 19 13 18 3 4 8 16 4 5 4 24 26 15 14 12 ]
T [ 19 31 35 52 29 12 7 5 25 22 8 5 12 24 34 25 26 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0167.1 PB0167 1 Sox13_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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