Detailed information of matrix profile PB0158.1

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Profile summary
Name: Rfx3_2
Matrix ID: PB0158.1
Class: Winged Helix-Turn-Helix
Family: RFX
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P48381  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 13 10 13 32 11 23 4 22 4 30 1 49 4 95 2 29 34 20 32 41 30 15 ]
C [ 28 60 16 28 23 38 29 84 19 3 3 2 0 2 1 94 39 20 47 27 20 18 31 ]
G [ 26 13 18 33 18 28 29 7 9 3 65 94 1 24 2 1 23 31 18 31 23 25 36 ]
T [ 15 14 56 26 28 23 19 5 50 90 1 2 50 70 2 2 9 15 15 10 16 27 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0158.1 PB0158 1 Rfx3_2 Mus musculus
RFX Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: