Detailed information of matrix profile PB0152.1

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Profile summary
Name: Nkx3-1_2
Matrix ID: PB0152.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P97436  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 19 12 15 33 47 65 4 1 90 5 6 11 8 24 36 19 9 ]
C [ 17 15 41 34 2 3 1 5 4 90 26 40 28 25 25 11 30 ]
G [ 21 26 21 19 40 26 90 4 5 1 3 2 36 37 13 37 25 ]
T [ 43 46 23 15 11 6 5 90 1 4 65 47 27 14 26 33 36 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0152.1 PB0152 1 Nkx3-1_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: