Detailed information of matrix profile PB0125.1

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Profile summary
Name: Gata3_2
Matrix ID: PB0125.1
Class: Zinc-coordinating
Family: GATA
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P23772  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 24 33 34 27 15 20 7 82 5 55 39 30 87 3 3 33 39 15 31 34 48 39 ]
C [ 14 11 18 28 26 40 3 7 6 14 28 23 2 2 90 3 19 36 24 17 21 12 ]
G [ 27 25 18 36 22 2 85 7 5 17 22 23 7 3 2 14 32 21 21 24 18 32 ]
T [ 35 30 30 9 38 38 5 4 84 15 11 24 3 92 5 50 10 27 24 25 14 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0125.1 PB0125 1 Gata3_2 Mus musculus
GATA Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Included Models:

GC Content: