Detailed information of matrix profile PB0121.1

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Profile summary
Name: Foxj3_2
Matrix ID: PB0121.1
Class: Winged Helix-Turn-Helix
Family: Forkhead
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8BUR3  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 25 16 27 34 32 2 12 2 3 25 1 10 21 11 26 26 22 ]
C [ 24 35 41 7 14 1 1 1 2 1 4 1 20 26 26 23 22 ]
G [ 22 31 10 13 13 1 86 1 4 24 28 85 39 10 30 16 25 ]
T [ 29 18 21 47 41 96 1 95 91 50 67 3 21 53 17 35 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0121.1 PB0121 1 Foxj3_2 Mus musculus
Forkhead Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: