Detailed information of matrix profile PB0120.1

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Profile summary
Name: Foxj1_2
Matrix ID: PB0120.1
Class: Winged Helix-Turn-Helix
Family: Forkhead
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q61660  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 17 14 21 16 15 4 3 5 37 1 9 50 10 33 23 ]
C [ 15 23 23 18 12 6 3 7 4 15 19 23 37 20 17 ]
G [ 45 20 39 14 3 80 14 3 55 3 54 19 19 28 17 ]
T [ 23 44 17 52 69 10 80 85 4 81 19 8 34 19 43 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0120.1 PB0120 1 Foxj1_2 Mus musculus
Forkhead Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: