Detailed information of matrix profile PB0119.1

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Profile summary
Name: Foxa2_2
Matrix ID: PB0119.1
Class: Winged Helix-Turn-Helix
Family: Forkhead
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P35583  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 20 13 20 14 15 7 15 14 7 71 10 16 25 16 15 ]
C [ 31 43 28 19 10 3 6 9 8 10 9 16 19 26 28 ]
G [ 29 23 29 14 15 8 72 3 6 10 23 9 13 24 23 ]
T [ 20 20 23 53 60 82 7 74 79 9 59 59 43 35 34 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0119.1 PB0119 1 Foxa2_2 Mus musculus
Forkhead Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: