Detailed information of matrix profile PB0107.1

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Profile summary
Name: Ascl2_2
Matrix ID: PB0107.1
Class: Zipper-Type
Family: Helix-Loop-Helix
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: O35885  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 11 19 34 31 14 8 15 14 34 3 12 11 20 42 11 19 ]
C [ 35 25 30 12 60 72 69 65 9 63 62 63 25 12 22 30 ]
G [ 29 12 20 16 12 14 7 13 37 7 10 9 22 28 25 15 ]
T [ 25 44 16 41 13 7 10 9 20 26 16 17 33 18 43 36 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0107.1 PB0107 1 Ascl2_2 Mus musculus
Helix-Loop-Helix Zipper-Type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: