Detailed information of matrix profile PB0082.1

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Profile summary
Name: Tcf3_1
Matrix ID: PB0082.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q9Z1J1  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 30 25 8 13 2 4 1 3 3 93 23 7 24 45 27 43 ]
C [ 16 16 15 31 48 80 2 1 0 6 0 1 50 13 13 12 18 ]
G [ 21 23 20 13 17 6 0 0 0 87 1 1 40 4 17 23 20 ]
T [ 32 31 40 49 21 13 94 97 96 4 6 76 4 58 25 37 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0082.1 PB0082 1 Tcf3_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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