Detailed information of matrix profile PB0078.1

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Profile summary
Name: Srf_1
Matrix ID: PB0078.1
Class: Other Alpha-Helix
Family: MADS
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q9JM73  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 12 32 5 1 60 31 72 23 67 32 16 3 37 41 ]
C [ 10 17 91 81 2 1 1 3 1 5 1 2 16 14 ]
G [ 15 19 2 1 3 1 3 1 1 5 81 91 16 17 ]
T [ 64 32 3 16 35 67 23 72 31 59 1 5 31 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0078.1 PB0078 1 Srf_1 Mus musculus
MADS Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: