Detailed information of matrix profile PB0077.1

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Profile summary
Name: Spdef_1
Matrix ID: PB0077.1
Class: Winged Helix-Turn-Helix
Family: Ets
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q9WTP3  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 40 47 39 34 72 17 5 12 0 0 96 24 16 4 35 12 ]
C [ 19 15 13 16 4 19 86 87 0 1 1 4 13 45 17 33 ]
G [ 31 23 30 25 6 7 9 1 99 99 1 1 61 3 29 27 ]
T [ 9 15 18 26 18 57 0 0 1 1 2 71 9 49 19 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0077.1 PB0077 1 Spdef_1 Mus musculus
Ets Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: