Detailed information of matrix profile PB0072.1

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Profile summary
Name: Sox5_1
Matrix ID: PB0072.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P35710  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 37 32 23 20 41 95 1 2 5 1 2 13 17 36 40 39 ]
C [ 18 9 22 24 9 0 1 1 1 1 13 63 29 26 15 17 ]
G [ 11 25 11 10 2 1 0 0 94 0 3 9 9 12 20 13 ]
T [ 33 33 43 45 49 3 97 97 1 98 83 15 45 26 26 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0072.1 PB0072 1 Sox5_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: