Detailed information of matrix profile PB0069.1

  1. Home
  2. Matrix > PB0069.1

Profile summary
Name: Sox21_1
Matrix ID: PB0069.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q811W0  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 25 34 21 38 85 12 24 82 4 73 82 10 36 40 39 24 ]
C [ 25 20 21 18 2 3 2 2 12 2 3 2 8 7 8 15 ]
G [ 14 11 18 16 2 3 2 12 2 2 3 2 12 26 21 33 ]
T [ 36 35 40 27 10 82 73 4 82 24 12 85 43 27 31 29 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0069.1 PB0069 1 Sox21_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: