Detailed information of matrix profile PB0067.1

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Profile summary
Name: Sox18_1
Matrix ID: PB0067.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P43680  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 26 21 25 18 55 26 76 92 2 97 96 6 28 30 39 40 ]
C [ 15 14 18 17 8 25 5 2 84 1 1 1 2 21 12 19 ]
G [ 24 28 10 28 14 28 8 1 3 0 1 1 29 33 13 24 ]
T [ 35 38 48 37 23 21 11 5 11 2 2 93 41 15 37 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0067.1 PB0067 1 Sox18_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: