Detailed information of matrix profile PB0054.1

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Profile summary
Name: Rfx3_1
Matrix ID: PB0054.1
Class: Winged Helix-Turn-Helix
Family: RFX
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P48381  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 28 26 34 38 27 12 10 1 0 1 7 0 0 98 33 2 12 28 22 20 52 29 40 ]
C [ 13 13 10 13 23 37 32 0 0 4 0 96 14 0 13 5 13 16 12 41 17 32 15 ]
G [ 20 19 27 19 18 19 37 99 0 0 92 0 1 1 29 93 58 37 31 28 19 13 23 ]
T [ 39 42 30 30 33 32 21 0 99 94 1 4 85 0 26 1 17 19 34 11 12 26 22 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0054.1 PB0054 1 Rfx3_1 Mus musculus
RFX Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: