Detailed information of matrix profile PB0040.1

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Profile summary
Name: Lef1_1
Matrix ID: PB0040.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P27782  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 19 40 27 62 2 92 3 2 97 99 97 5 17 38 32 22 23 ]
C [ 22 17 22 6 28 0 0 95 0 0 0 4 14 14 24 30 28 ]
G [ 34 15 17 12 68 0 0 3 0 1 2 91 62 40 15 15 21 ]
T [ 25 28 35 20 3 8 97 1 2 1 2 1 7 7 29 33 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0040.1 PB0040 1 Lef1_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: