Detailed information of matrix profile MA1401.1

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Profile summary
Name: EPR1
Matrix ID: MA1401.1
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: B3H5A8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 252 421 594 597 597 0 597 0 0 22 154 297 ]
C [ 93 9 0 0 0 0 0 0 597 46 100 102 ]
G [ 164 16 0 0 0 0 0 0 0 3 66 108 ]
T [ 88 151 3 0 0 597 0 597 0 526 277 90 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1401.1 MA1401 1 EPR1 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0327.1

ChIP-seq Centrality
log(P-value): -88429.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0327.1

ChIP-seq Centrality
log(P-value): -88215.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: