Detailed information of matrix profile MA1399.1

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Profile summary
Name: At5g08520
Matrix ID: MA1399.1
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9FNN6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 194 292 248 209 221 197 0 598 0 590 598 5 204 ]
C [ 69 23 17 42 59 2 0 0 0 0 0 53 40 ]
G [ 166 72 15 180 30 376 596 0 0 8 0 495 312 ]
T [ 169 211 318 167 288 23 2 0 598 0 0 45 42 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1399.1 MA1399 1 At5g08520 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0274.1

ChIP-seq Centrality
log(P-value): -10116.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0274.1

ChIP-seq Centrality
log(P-value): -10106.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: