Detailed information of matrix profile MA1386.1

  1. Home
  2. Matrix > MA1386.1

Profile summary
Name: AT1G25550
Matrix ID: MA1386.1
Class: Other
Family: G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9FPE8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 179 186 99 435 584 0 599 1 14 0 16 ]
C [ 154 145 94 47 9 0 0 0 1 599 280 ]
G [ 47 103 314 37 0 369 0 0 0 0 41 ]
T [ 219 165 92 80 6 230 0 598 584 0 262 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1386.1 MA1386 1 AT1G25550 Arabidopsis thaliana
G2-like Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0232.1

ChIP-seq Centrality
log(P-value): -10037.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0232.1

ChIP-seq Centrality
log(P-value): -10086.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: