Detailed information of matrix profile MA1384.1

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Profile summary
Name: AT2G01060
Matrix ID: MA1384.1
Class: Other
Family: G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9SJW0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 344 349 301 261 0 451 598 0 531 3 88 14 26 ]
C [ 58 24 87 122 0 86 0 0 67 0 44 542 273 ]
G [ 90 94 110 215 598 1 0 0 0 0 13 5 114 ]
T [ 106 131 100 0 0 60 0 598 0 595 453 37 185 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1384.1 MA1384 1 AT2G01060 Arabidopsis thaliana
G2-like Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0249.1

ChIP-seq Centrality
log(P-value): -15471.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0249.1

ChIP-seq Centrality
log(P-value): -15403.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: