Detailed information of matrix profile MA1380.1

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Profile summary
Name: AT2G20110
Matrix ID: MA1380.1
Class: Other
Family: CPP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9SL70  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 236 0 0 0 403 597 597 91 152 8 51 139 232 425 409 ]
C [ 0 0 0 82 0 0 0 16 96 30 18 45 16 8 19 ]
G [ 33 0 85 0 194 0 0 0 13 0 65 49 112 20 12 ]
T [ 328 597 512 515 0 0 0 490 336 559 463 364 237 144 157 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1380.1 MA1380 1 AT2G20110 Arabidopsis thaliana
CPP Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0251.1

ChIP-seq Centrality
log(P-value): -2241.81

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0251.1

ChIP-seq Centrality
log(P-value): -2239.42

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: