Detailed information of matrix profile MA1379.1

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Profile summary
Name: SOL1
Matrix ID: MA1379.1
Class: Other
Family: CPP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9M9H7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 192 95 167 219 441 543 466 484 0 0 0 482 555 599 268 ]
C [ 17 16 37 69 54 0 3 0 0 0 169 0 45 0 16 ]
G [ 27 6 7 46 70 43 66 23 0 0 0 118 0 1 0 ]
T [ 364 483 389 266 35 14 65 93 600 600 431 0 0 0 316 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1379.1 MA1379 1 SOL1 Arabidopsis thaliana
CPP Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0386.1

ChIP-seq Centrality
log(P-value): -4228.87

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0386.1

ChIP-seq Centrality
log(P-value): -4167.08

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: