Detailed information of matrix profile MA1378.1

  1. Home
  2. Matrix > MA1378.1

Profile summary
Name: PLT3
Matrix ID: MA1378.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11058102
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 11 135 2 33 2 222 167 368 223 96 37 23 83 98 131 ]
C [ 345 351 24 357 7 0 7 16 24 153 372 11 78 14 260 ]
G [ 16 13 3 33 517 278 238 46 41 97 17 473 59 386 24 ]
T [ 159 32 502 108 5 31 119 101 243 185 105 24 311 33 116 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1378.1 MA1378 1 PLT3 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0377.1

ChIP-seq Centrality
log(P-value): -750.17

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0377.1

ChIP-seq Centrality
log(P-value): -719.694

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: