Detailed information of matrix profile MA1374.1

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Profile summary
Name: IDD7
Matrix ID: MA1374.1
Class: C2H2 zinc finger factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q8H1F5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 190 394 95 400 489 424 528 136 2 575 0 574 576 540 441 293 267 244 ]
C [ 232 20 224 3 1 49 31 375 0 9 585 0 2 11 25 89 77 95 ]
G [ 44 153 197 36 0 88 23 57 583 0 0 11 6 29 39 66 62 108 ]
T [ 119 18 69 146 95 24 3 17 0 1 0 0 1 5 80 137 179 138 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1374.1 MA1374 1 IDD7 Arabidopsis thaliana
C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0352.1

ChIP-seq Centrality
log(P-value): -10957.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0352.1

ChIP-seq Centrality
log(P-value): -10806.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: