Detailed information of matrix profile MA1372.1

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Profile summary
Name: STZ
Matrix ID: MA1372.1
Class: C2H2 zinc finger factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q96289  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 23 431 34 132 158 161 0 600 0 30 173 ]
C [ 402 0 325 102 155 153 486 0 444 13 158 ]
G [ 14 15 157 0 128 1 0 0 156 0 133 ]
T [ 161 154 84 366 159 285 114 0 0 557 136 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1372.1 MA1372 1 STZ Arabidopsis thaliana
C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0392.1

ChIP-seq Centrality
log(P-value): -12618.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0392.1

ChIP-seq Centrality
log(P-value): -11668.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: