Detailed information of matrix profile MA1361.1

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Profile summary
Name: bHLH18
Matrix ID: MA1361.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21335373
Uniprot ID: Q1PF17  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 34 109 0 38 28 12 60 55 61 11 193 0 9 7 0 29 39 ]
C [ 128 2 143 4 32 13 15 27 61 190 0 199 0 3 0 34 60 ]
G [ 20 58 7 153 8 116 29 31 15 0 4 0 192 0 197 79 34 ]
T [ 19 32 51 6 133 60 97 88 64 0 4 2 0 191 4 59 68 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1361.1 MA1361 1 bHLH18 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: