Detailed information of matrix profile MA1349.1

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Profile summary
Name: bZIP16
Matrix ID: MA1349.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: Q501B2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 14 0 65 0 594 0 1 0 27 279 69 180 277 199 159 ]
C [ 94 0 529 594 0 587 7 0 265 0 254 334 75 116 160 ]
G [ 22 561 0 0 0 7 586 0 302 170 174 28 60 52 70 ]
T [ 464 33 0 0 0 0 0 594 0 145 97 52 182 227 205 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1349.1 MA1349 1 bZIP16 Arabidopsis thaliana
Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0303.1

ChIP-seq Centrality
log(P-value): -5826.26

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0303.1

ChIP-seq Centrality
log(P-value): -5832.45

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: