Detailed information of matrix profile MA1348.1

  1. Home
  2. Matrix > MA1348.1

Profile summary
Name: TGA9
Matrix ID: MA1348.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: Q93XM6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 51 318 8 0 591 0 11 1 16 567 13 ]
C [ 51 198 0 0 0 548 0 0 552 0 239 ]
G [ 481 76 1 526 1 0 581 0 24 25 76 ]
T [ 9 0 583 66 0 44 0 591 0 0 264 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1348.1 MA1348 1 TGA9 Arabidopsis thaliana
Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0407.1

ChIP-seq Centrality
log(P-value): -9994.43

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0407.1

ChIP-seq Centrality
log(P-value): -9804.64

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: