Detailed information of matrix profile MA1342.1

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Profile summary
Name: bZIP50
Matrix ID: MA1342.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: Q93ZE2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 112 60 296 5 0 597 0 16 0 4 590 15 129 189 139 131 104 ]
C [ 124 60 231 1 0 0 572 1 0 585 0 239 228 119 116 165 190 ]
G [ 84 408 70 0 518 0 0 580 0 8 5 64 56 90 110 62 90 ]
T [ 277 69 0 591 79 0 25 0 597 0 2 279 184 199 232 239 213 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1342.1 MA1342 1 bZIP50 Arabidopsis thaliana
Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0308.1

ChIP-seq Centrality
log(P-value): -10879.2

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0308.1

ChIP-seq Centrality
log(P-value): -10867.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: