Detailed information of matrix profile MA1328.1

  1. Home
  2. Matrix > MA1328.1

Profile summary
Name: ATHB34
Matrix ID: MA1328.1
Class: Homeo domain factors
Family: ZF-HD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: Q8LFD3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 241 152 226 332 221 138 174 242 15 4 600 599 4 0 539 ]
C [ 11 45 52 92 76 137 182 175 225 1 0 0 9 222 13 ]
G [ 11 17 4 66 102 55 93 127 19 0 0 1 0 6 32 ]
T [ 337 386 318 110 201 270 151 56 341 595 0 0 587 372 16 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1328.1 MA1328 1 ATHB34 Arabidopsis thaliana
ZF-HD Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0292.1

ChIP-seq Centrality
log(P-value): -3542.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0292.1

ChIP-seq Centrality
log(P-value): -3541.59

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: