Detailed information of matrix profile MA1327.1

  1. Home
  2. Matrix > MA1327.1

Profile summary
Name: ATHB23
Matrix ID: MA1327.1
Class: Homeo domain factors
Family: ZF-HD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 364 318 201 164 183 26 455 593 0 0 599 423 73 157 300 227 156 252 373 294 165 235 ]
C [ 22 43 64 167 89 16 1 0 0 0 0 19 101 62 46 104 71 37 21 44 32 33 ]
G [ 33 52 94 117 105 13 143 0 0 0 0 155 123 146 124 89 78 67 71 50 31 47 ]
T [ 180 186 240 151 222 544 0 6 599 599 0 2 302 234 129 179 294 243 134 211 371 284 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1327.1 MA1327 1 ATHB23 Arabidopsis thaliana
ZF-HD Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0288.1

ChIP-seq Centrality
log(P-value): -16661.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0288.1

ChIP-seq Centrality
log(P-value): -16596.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: