Detailed information of matrix profile MA1325.1

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Profile summary
Name: GATA14
Matrix ID: MA1325.1
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12504119
Uniprot ID: Q9M1U2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 81 100 81 497 0 551 0 4 2 202 189 106 71 86 99 ]
C [ 101 119 87 4 1 0 2 547 97 46 70 55 112 124 125 ]
G [ 89 133 42 26 550 0 0 0 31 296 127 70 83 97 119 ]
T [ 280 199 341 24 0 0 549 0 421 7 165 320 285 244 208 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1325.1 MA1325 1 GATA14 Arabidopsis thaliana
GATA-type zinc fingers Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: