Detailed information of matrix profile MA1324.1

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Profile summary
Name: GATA20
Matrix ID: MA1324.1
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12504119
Uniprot ID: Q9ZPX0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 70 0 2 13 0 76 0 2 ]
C [ 0 8 70 25 0 0 0 73 ]
G [ 1 0 0 38 76 0 0 0 ]
T [ 5 68 4 0 0 0 76 1 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1324.1 MA1324 1 GATA20 Arabidopsis thaliana
GATA-type zinc fingers Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: