Detailed information of matrix profile MA1322.1

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Profile summary
Name: SPL9
Matrix ID: MA1322.1
Class: SBP-type zinc finger
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 16554053
Uniprot ID: Q700W2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 236 160 22 0 1 597 0 1 89 247 140 ]
C [ 131 104 117 0 0 3 600 28 18 90 161 ]
G [ 110 92 80 600 0 0 0 310 283 69 66 ]
T [ 123 244 381 0 599 0 0 261 210 194 233 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1322.1 MA1322 1 SPL9 Arabidopsis thaliana
SBP-type zinc finger
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0391.1

ChIP-seq Centrality
log(P-value): -41985.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0391.1

ChIP-seq Centrality
log(P-value): -41877.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: