Detailed information of matrix profile MA1317.1

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Profile summary
Name: WRKY50
Matrix ID: MA1317.1
Class: WRKY
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q8VWQ5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 215 274 406 502 511 543 0 0 0 565 559 239 163 ]
C [ 87 90 48 14 4 1 0 1 568 0 2 216 88 ]
G [ 124 88 63 23 10 22 568 0 0 0 1 56 213 ]
T [ 142 116 51 29 43 2 0 567 0 3 6 57 104 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1317.1 MA1317 1 WRKY50 Arabidopsis thaliana
WRKY
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0425.1

ChIP-seq Centrality
log(P-value): -31467.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0425.1

ChIP-seq Centrality
log(P-value): -27501.7

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: