Detailed information of matrix profile MA1310.1

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Profile summary
Name: WRKY42
Matrix ID: MA1310.1
Class: WRKY
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9XEC3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 55 71 64 75 125 118 81 75 96 67 51 1 0 0 0 309 0 6 97 82 63 ]
C [ 73 45 34 41 72 92 88 79 51 69 184 0 0 0 0 0 309 90 38 45 48 ]
G [ 70 58 68 92 55 30 39 49 93 89 28 301 0 0 307 0 0 7 37 38 92 ]
T [ 111 135 143 101 57 69 101 106 69 84 46 7 309 309 2 0 0 206 137 144 106 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1310.1 MA1310 1 WRKY42 Arabidopsis thaliana
WRKY
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: