Detailed information of matrix profile MA1294.1

  1. Home
  2. Matrix > MA1294.1

Profile summary
Name: MYB62
Matrix ID: MA1294.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22197883
Uniprot ID: Q9C9G7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 198 170 204 213 227 299 112 0 0 411 0 0 5 228 130 ]
C [ 60 88 48 66 23 12 32 0 0 0 0 0 188 47 66 ]
G [ 96 74 76 61 60 58 263 5 0 0 440 440 5 71 134 ]
T [ 86 108 112 100 130 71 33 435 440 29 0 0 242 94 110 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1294.1 MA1294 1 MYB62 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: