Detailed information of matrix profile MA1293.1

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Profile summary
Name: MYB57
Matrix ID: MA1293.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22197883
Uniprot ID: Q9SSA1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 76 109 0 500 0 0 2 597 597 1 44 95 133 171 ]
C [ 199 151 20 0 597 597 0 0 0 483 57 127 108 88 ]
G [ 53 81 22 97 0 0 0 0 0 0 0 20 56 67 ]
T [ 269 256 555 0 0 0 595 0 0 113 496 355 300 271 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1293.1 MA1293 1 MYB57 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0366.1

ChIP-seq Centrality
log(P-value): -42254.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0366.1

ChIP-seq Centrality
log(P-value): -41968.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: