Detailed information of matrix profile MA1292.1

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Profile summary
Name: MYB27
Matrix ID: MA1292.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22197883
Uniprot ID: Q9SCP1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 278 357 385 469 495 412 0 0 595 0 0 0 512 277 315 ]
C [ 80 55 19 0 0 0 0 0 0 0 0 5 48 66 55 ]
G [ 109 77 71 6 2 178 1 0 0 596 596 0 25 103 139 ]
T [ 129 107 121 121 99 6 595 596 1 0 0 591 11 150 87 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1292.1 MA1292 1 MYB27 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0360.1

ChIP-seq Centrality
log(P-value): -10388.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0360.1

ChIP-seq Centrality
log(P-value): -10001.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: