Detailed information of matrix profile MA1288.1

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Profile summary
Name: At1g72010
Matrix ID: MA1288.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: Q9C7G4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 227 165 12 0 1 0 57 172 0 1 45 441 51 ]
C [ 93 87 2 25 0 0 3 227 595 594 439 25 321 ]
G [ 109 112 581 0 594 595 513 58 0 0 9 87 70 ]
T [ 166 231 0 570 0 0 22 138 0 0 102 42 153 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1288.1 MA1288 1 At1g72010 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0243.1

ChIP-seq Centrality
log(P-value): -6907.88

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0243.1

ChIP-seq Centrality
log(P-value): -6896.35

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: