Detailed information of matrix profile MA1286.1

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Profile summary
Name: TCP24
Matrix ID: MA1286.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: Q9C758  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 153 113 74 12 0 0 527 0 0 567 16 195 ]
C [ 81 108 100 11 0 0 24 594 594 0 560 192 ]
G [ 214 94 196 553 593 594 26 0 0 27 9 40 ]
T [ 146 279 224 18 1 0 17 0 0 0 9 167 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1286.1 MA1286 1 TCP24 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0396.1

ChIP-seq Centrality
log(P-value): -10268.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0396.1

ChIP-seq Centrality
log(P-value): -10268.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: