Detailed information of matrix profile MA1285.1

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Profile summary
Name: At2g45680
Matrix ID: MA1285.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: O64647  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 77 85 195 65 50 103 65 92 89 46 1 16 1 24 53 0 2 1 356 2 104 ]
C [ 192 205 79 89 55 58 92 170 166 13 19 0 0 0 97 388 393 371 1 346 178 ]
G [ 60 57 51 49 78 42 151 30 34 332 1 379 394 370 23 0 0 1 38 11 36 ]
T [ 66 48 70 192 212 192 87 103 106 4 374 0 0 1 222 7 0 22 0 36 77 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1285.1 MA1285 1 At2g45680 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0255.1

ChIP-seq Centrality
log(P-value): -1088.89

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0255.1

ChIP-seq Centrality
log(P-value): -1109.07

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: